SNP Profiles matching EQX 69 [EQX]

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 Key

 1234567891011121314
_Input profile
TTCCCCGGCTAGAACCAACTAAGGAACC
1._EQX_69_[EQX]
__CCGGCT_AACCAACT__AA_
2._EQX_69_[EQX]
__CCGGCT_AACCAACT__AA_
3._EQX_69_[EQX]
__CCGGCT_AACCAACT__AA_
4._EQX_69_[EQX]
__CCGGCT_AACCAACT__AA_
5._EQX_69_[EQX]
__CCGGCT_AACCAACT__AA_
6._EQX_69_[EQX]
__CCGGCT_AACCAACT__AA_
7._EQX_69_[EQX]
__CCGGCT_AACCAACT__AA_
8._EQX_69_[EQX]
__CCGGCT_AACCAACT__AA_
9._EQX_69_[EQX]
___GGCT__CCAACT__AA_
10._RUQ_100
__CCGGCT_AACCAACT__AA_
11._GC-01-008-1-08
TTCCCCGGCTAGAACCAACTAAGGAACG
12._GC-01-008-1-08
TTCCCCGGCTAGAACCAACTAAGGAACG
13._GC-01-008-1-08
TTCCCCGGCTAGAACCAACTAAGGAACG
14._GC-01-008-1-08
TTCCCCGGCTAGAACCAACTAAGGAACG
15._GC-01-008-1-08
TTCCCCGGCTAGAACCAACTAAGGAACG
16._GC-01-008-1-08
TTCCCCGGCTAGAACCAACTAAGGAACG
17._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
18._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
19._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
20._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
21._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
22._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
23._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
24._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
25._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
26._GC-01-008-1-08
TTCCCCGGCTAGAACCAACTAAGGAACG
27._GC-01-008-1-08
TTCCCCGGCTAGAACCAACTAAGGAACG
28._GC-08-069-1-91
TTCCCCGGCTAGAACCAACTAAGGAACG
29._GC-01-008-1-08
TTCC_GGCTAG_CCAACTAAGGAACG
 1516171819202122232425262728
_Input profile
AGCCGTCGCCCTCTTTGGAGGTACCGCC
1._EQX_69_[EQX]
AGCCGTCGCC_CT_GG___CG_
2._EQX_69_[EQX]
AGCCGTCGCC_CT_GG___CG_
3._EQX_69_[EQX]
AGCCGTCGCC_CT_GG___CG_
4._EQX_69_[EQX]
AGCCGTCGCC_CT_GG___CG_
5._EQX_69_[EQX]
AGCCGTCGCC_CT_GG___CG_
6._EQX_69_[EQX]
AGCCGTCGCC_CT_GG___CG_
7._EQX_69_[EQX]
AGCCGTCGCC_CT_GG___CG_
8._EQX_69_[EQX]
_CCGTCGCC_CT_GG___CG_
9._EQX_69_[EQX]
AGCCGTCGCC_CT_GG___CG_
10._RUQ_100
AGCCGTCGCC_CT_GG___CG_
11._GC-01-008-1-08
AGCCGTCGCCCTCTCTGGAGGTACCGCC
12._GC-01-008-1-08
AGCCGTCGCCCTCTCTGGAGGTACCGCC
13._GC-01-008-1-08
AGCCGTCGCCCTCTCTGGAGGTACCGCC
14._GC-01-008-1-08
AGCCGTCGCCCTCTCTGGAGGTACCGCC
15._GC-01-008-1-08
AGCCGTCGCCCTCTCTGGAGGTACCGCC
16._GC-01-008-1-08
AGCCGTCGCCCTCTCTGGAGGTACCGCC
17._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
18._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
19._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
20._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
21._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
22._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
23._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
24._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
25._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
26._GC-01-008-1-08
AGCCGTCGCCCTCTCTGGAGGTACCGCC
27._GC-01-008-1-08
_CCGTCGCCCTCTCTGGAGGTACCGCC
28._GC-08-069-1-91
AGCCGTCGCCCTCTCTGGAGGTACCGCC
29._GC-01-008-1-08
AGCCGTCGCCCTCTCTGGAGGTACCGCC
 29303132333435363738394041 
_Input profile
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
1._EQX_69_[EQX]
CCAG_CT___TT__TTCGAAX_X
2._EQX_69_[EQX]
CCAG_CT___TT__TTCGAAX_X
3._EQX_69_[EQX]
CCAG_CT___TT__TTCGAAX_X
4._EQX_69_[EQX]
CCAG_CT___TT__TTCGAAX_X
5._EQX_69_[EQX]
CCAG_CT___TT__TTCGAAX_X
6._EQX_69_[EQX]
CCAG_CT___TT__TTCGAAX_X
7._EQX_69_[EQX]
CCAG_CT___TT__TTCGAAX_X
8._EQX_69_[EQX]
CCAG_CT___TT__TTCGAAX_X
9._EQX_69_[EQX]
CCAG_CT___TT__TTCGAAX_X
10._RUQ_100
CCAG_CT___TT__TTCGAGX_X
11._GC-01-008-1-08
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
12._GC-01-008-1-08
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
13._GC-01-008-1-08
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
14._GC-01-008-1-08
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
15._GC-01-008-1-08
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
16._GC-01-008-1-08
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
17._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
18._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
19._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
20._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
21._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
22._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
23._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
24._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
25._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
26._GC-01-008-1-08
CCAGCCCTGG_TTTTTTTTTTCGAAX_X
27._GC-01-008-1-08
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X
28._GC-08-069-1-91
CCAGCCCTGGGGTTTTTTTTTT_AAX_X
29._GC-01-008-1-08
CCAGCCCTGGGGTTTTTTTTTTCGAAX_X

Input profile: EQX_69_[EQX] RUQ_100

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._EQX_69_[EQX]

identical
23 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 7 > FP
 Dapeng Zhang, 2016

2._EQX_69_[EQX]

identical
23 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 14 > F
 Dapeng Zhang, 2016

3._EQX_69_[EQX]

identical
23 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 10 > F
 Dapeng Zhang, 2016

4._EQX_69_[EQX]

identical
23 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 12
 Dapeng Zhang, 2016

5._EQX_69_[EQX]

identical
23 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 3
 Dapeng Zhang, 2016

6._EQX_69_[EQX]

identical
23 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 2
 Dapeng Zhang, 2016

7._EQX_69_[EQX]

identical
23 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

8._EQX_69_[EQX]

identical
22 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 16
 Dapeng Zhang, 2016

9._EQX_69_[EQX]

identical
21 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 9 > FP
 Dapeng Zhang, 2016

10._EQX_69_[EQX] RUQ_100

97.8 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

11._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

12._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

13._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP4
 Mars, 2018

14._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

15._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

16._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018

17._EQX_78_[EQX] GC-08-069-1-91

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

18._EQX_78_[EQX] GC-08-069-1-91

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

19._EQX_78_[EQX] GC-08-069-1-91

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

20._EQX_78_[EQX] GC-08-069-1-91

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

21._EQX_78_[EQX] GC-08-069-1-91

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

22._EQX_78_[EQX] GC-08-069-1-91

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

23._EQX_78_[EQX] GC-08-069-1-91

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

24._EQX_78_[EQX] GC-08-069-1-91

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

25._EQX_78_[EQX] GC-08-069-1-91

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

26._EQX_69_[EQX] GC-01-008-1-08

97.5 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

27._EQX_69_[EQX] GC-01-008-1-08

97.5 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

28._EQX_78_[EQX] GC-08-069-1-91

97.5 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

29._EQX_69_[EQX] GC-01-008-1-08

97.4 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

 

  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP560 18TcSNP577 19TcSNP591 20TcSNP602
21TcSNP619 22TcSNP702 23TcSNP723 24TcSNP731 25TcSNP799
26TcSNP823 27TcSNP872 28TcSNP878 29TcSNP891 30TcSNP998
31TcSNP999 32TcSNP1060 33TcSNP1063 34TcSNP1111 35TcSNP1126
36TcSNP1253 37TcSNP1309 38TcSNP1439 39TcSNP1442 40TcSNP1458
41TcSNP1484